Day 1 (Thursday, October 20th)
08h30 - 09h15 | Registration |
09h15 - 09h30 | Opening |
09h30 - 10h30 |
Invited Speaker: Dennis Bray, University of Cambridge Protein Networks versus Microchips |
10h30 - 11h00 | Coffee break |
11h00 - 12h30 | Session 1: Model Simulation |
11h00 - 11h30 |
Sucheendra K. Palaniappan, Matthieu Pichené, Gregory Batt, Eric Fabre and Blaise Genest, A Look-ahead Simulation Algorithm for DBN Models of Biochemical Pathways |
11h30 - 12h00 | Mostafa Herajy and Monika Heiner, Accelerated Simulation of Hybrid Biological Models with Quasi-disjoint Deterministic and Stochastic Subnets |
12h00 - 12h30 | Thilo Krüger and Verena Wolf, Hybrid stochastic simulation of rule-based polymerization models |
12h30 - 14h00 | Lunch break |
14h00 - 15h00 |
Invited Speaker: Guillaume Beslon, INSA-Lyon Analyzing the past to understand the present: How evolution shapes biological systems? |
15h00 - 15h30 | Coffee break |
15h30 - 17h00 | Session 2: Model Analysis |
15h30 - 16h00 | Matej Hajnal, David Šafránek, Martin Demko, Samuel Pastva, Pavel Krejčí and Lubos Brim, Toward Modelling and Analysis of Transient and Sustained Behaviour of Signalling Pathways |
16h30 - 16h30 | Alexandre Rocca, Thao Dang, Eric Fanchon and Jean-Marc Moulis, Application of the Reachability Analysis for the Iron Homeostasis Study |
16h30 - 17h00 | Andreea Beica and Vincent Danos, Synchronous Balanced Analysis |
17h00 - 18h00 | Poster Session |
Day 2 (Friday, October 21st)
09h30 - 10h30 |
Invited Speaker: Albert Goldbeter, Modeling the cell cycle by differential equations and cellular automata |
10h30 - 11h00 | Coffee break |
11h00 - 12h30 | Session 3: Discrete and network modelling |
11h00 - 11h30 | Elisabetta De Maria, Alexandre Muzy, Daniel Gaffé, Annie Ressouche and Franck Grammont, Verification of Temporal Properties of Neuronal Archetypes Modeled as Synchronous Reactive Systems |
11h30 - 12h00 | Hugues Mandon, Stefan Haar and Loïc Paulevé, Relationship between the Reprogramming Determinants of Boolean Networks and their Interaction Graph |
12h00 - 12h30 | Hui Kong, Ezio Bartocci, Sergiy Bogomolov, Radu Grosu, Thomas Henzinger, Yu Jiang and Christian Schilling, Discrete Abstraction of Multiaffine Systems |
12h30 - 14h00 | Lunch break |
14h00 - 15h00 |
Invited Speaker: Linda Petzold, University of California, Santa Barbara Functional Network Inference of the Suprachiasmatic Nucleus |
15h00 - 16h00 | Session 4: Stochastic Modelling |
15h00 - 15h30 | Luca Bortolussi, Alberto Policriti and Simone Silvetti, Logic-based Multi-Objective Design of Chemical Reaction Networks |
15h30 - 16h00 | Eugenio Cinquemani, On observability and reconstruction of promoter activity statistics from reporter protein mean and variance profiles |
16h00 - 18h00 | Farewell Coffee and Poster Session |